PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019170000.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

TALE

Protein Properties

Length: 582aa MW: 63907.6 Da PI: 7.0522

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019170000.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	27.3	6.1e-09	374	411	19	54
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yps ++ LA+++gL+ +qV++WF N R + XP_019170000.1 374 FEHflHPYPSDVDKHILARQTGLSRSQVSNWFINARVR 411 564459******************************88 PP
2	BELL	106	2.5e-34	236	304	4	72
BELL 4 elqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 elqk k+kLl+ll+eVd+rYk+y++q+ +v+ssFeavag g+a++Y +lA++ +SrhFrcL+dai q+ XP_019170000.1 236 ELQKTKSKLLHLLDEVDRRYKHYRDQMTAVVSSFEAVAGDGAATVYSALASRVMSRHFRCLRDAILAQL 304 89***************************************************************9996 PP

Sequence ? help Back to Top
Protein Sequence Length: 582 aa Download sequence
MAGEEGEGKG RSSSMVTNTG YWYSDSAMNT QIQSGHMMSQ LQSFEPNPEI YNLSSGMEMM 60 VGFPFKNLQA QSDMWKPVPL SHSENMVAGG GGAPVLGGGG WAVEGNNNSN EMKVSITQKG 120 LSLSLSSTNP SAIGFNSFDD LRLMAASSSS SRLNNIQHDE DDRFLGKPEN LGHPSQDYFF 180 QIRSSKYLGP AQELLKEFCC VGTTQSDEPK RKSQWQQDDH TTSSQNHSLG SLHFLELQKT 240 KSKLLHLLDE VDRRYKHYRD QMTAVVSSFE AVAGDGAATV YSALASRVMS RHFRCLRDAI 300 LAQLKAAKKA MAEKESSSAA PGATKGETPR LKMIDQTLRQ QKAIQQLTMM DSHPWRPQRG 360 LPERSVSVLR AWLFEHFLHP YPSDVDKHIL ARQTGLSRSQ VSNWFINARV RLWKPMVEEM 420 YLEEVKEQDN IMGSSDGSRA AVDGGSGRER LDKKPNVVRL DSECISSLIN IPAKAGGDHH 480 QFGAVELDFS PYTHNSGGAV GYRPGERKTG GGGGVSLTLG LQQHGGSGIG LAFSPTSQNS 540 LFYPRDQIGD CPPVQYSLLD GEGQNLPYRN LMGSQLLHDL AG

Sequence ? help Back to Top

Protein Sequence Length: 582 aa Download sequence

MAGEEGEGKG RSSSMVTNTG YWYSDSAMNT QIQSGHMMSQ LQSFEPNPEI YNLSSGMEMM  60
VGFPFKNLQA QSDMWKPVPL SHSENMVAGG GGAPVLGGGG WAVEGNNNSN EMKVSITQKG  120
LSLSLSSTNP SAIGFNSFDD LRLMAASSSS SRLNNIQHDE DDRFLGKPEN LGHPSQDYFF  180
QIRSSKYLGP AQELLKEFCC VGTTQSDEPK RKSQWQQDDH TTSSQNHSLG SLHFLELQKT  240
KSKLLHLLDE VDRRYKHYRD QMTAVVSSFE AVAGDGAATV YSALASRVMS RHFRCLRDAI  300
LAQLKAAKKA MAEKESSSAA PGATKGETPR LKMIDQTLRQ QKAIQQLTMM DSHPWRPQRG  360
LPERSVSVLR AWLFEHFLHP YPSDVDKHIL ARQTGLSRSQ VSNWFINARV RLWKPMVEEM  420
YLEEVKEQDN IMGSSDGSRA AVDGGSGRER LDKKPNVVRL DSECISSLIN IPAKAGGDHH  480
QFGAVELDFS PYTHNSGGAV GYRPGERKTG GGGGVSLTLG LQQHGGSGIG LAFSPTSQNS  540
LFYPRDQIGD CPPVQYSLLD GEGQNLPYRN LMGSQLLHDL AG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G41410.1	1e-124	TALE family protein