PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019169641.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | bHLH | ||||||||
Protein Properties | Length: 209aa MW: 23601.7 Da PI: 7.7893 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 22.8 | 1.6e-07 | 4 | 51 | 6 | 55 |
HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +++E++RRd+++s ++ L +llP+ + + + + + +Av+YI+ Lq XP_019169641.1 4 KQVEKKRRDNLKSLYNHLFSLLPTHI--SLGGMALPDQVGEAVNYIQTLQ 51 689*********************84..5555777799*********998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 209 aa Download sequence |
MERKQVEKKR RDNLKSLYNH LFSLLPTHIS LGGMALPDQV GEAVNYIQTL QNQLEKNKQK 60 KQKLLLLMEQ QRKRPHYYSS SSSSSSSSSS NFCSNSTTKK PLIQVVDIAP DIDVVLIDGL 120 EDIAAFHNII AILNRHGLEV STAIFQPRGN STLQILHQQQ TKTVYEKLKQ AVNGSSGDEP 180 ESLDSWDYDI WGFPILETSQ GQLHNPPPY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G20970.1 | 4e-11 | bHLH family protein |