PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019169573.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | MYB | ||||||||
Protein Properties | Length: 363aa MW: 40973.8 Da PI: 7.8846 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 56.5 | 6.4e-18 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g W++eEde+l++ ++++G g+W+++++ g+ R++k+c++rw +yl XP_019169573.1 14 KGLWSPEEDEKLIKHITKYGHGCWSSVPKLAGLQRCGKSCRLRWINYL 61 678*******************************************97 PP | |||||||
2 | Myb_DNA-binding | 46.4 | 9.2e-15 | 67 | 109 | 1 | 45 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 rg +++eE+ l+v++++ lG++ W+ Ia++++ gRt++++k+ w+ XP_019169573.1 67 RGTFSQEEESLIVELHAVLGNK-WSQIAARLP-GRTDNEIKNLWN 109 899*******************.*********.*********998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 363 aa Download sequence |
MGRHSCCYKQ KLRKGLWSPE EDEKLIKHIT KYGHGCWSSV PKLAGLQRCG KSCRLRWINY 60 LRPDLKRGTF SQEEESLIVE LHAVLGNKWS QIAARLPGRT DNEIKNLWNS SIKKKLRQKG 120 IDPNTHKPLS EVENDQENPS AATKKTGIAS QDSGELSLME SEHHLLSPPA PEPNNNNTNL 180 SAMAPMDRFS ALPAAAPPQE FFPNTATKIP DLTAYLCFQQ MNNYSPSNNT NTNLFFNPNN 240 NNNNVPNSVL PPPSISNSNS SSFFEPNNGF PWEVCGKPEN KETEEIKWSD YLQTPFLLGN 300 TIHNIQAPHH HHHDLFNETK PETQFAAAQP SLPTTWLQND QHPSLYNNAK HFQRISAAFG 360 QFS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G09540.1 | 1e-89 | MYB family protein |