PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019169484.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family bHLH
Protein Properties Length: 346aa    MW: 38989.1 Da    PI: 6.8943
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019169484.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH36.58.5e-12169215455
                     HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                      h ++Er+RR+++ ++f  L  l+P +     kK++Ka++L  A++++k+Lq
  XP_019169484.1 169 DHIIAERKRREKLSQRFIALSALVPGL-----KKMDKASVLGDAIKHLKQLQ 215
                     699************************.....9******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 346 aa     Download sequence    
MEIANMRSLA ELGMEDSAYL QHWPICSLDE LSAIPVSATF SDTLNPPFSQ LHHHHHHQPI  60
YGVKRPLELS QACEEDAAMK HPRTNSWSSS ENDHAFSSQS VHQSFHVVNS DYSNQIRTRR  120
PKEETISHPS AITFHADHHH ILSQDPFVNQ NFVFKAGQEA KKISNTAQDH IIAERKRREK  180
LSQRFIALSA LVPGLKKMDK ASVLGDAIKH LKQLQERVKM LEEQTRKKSA HQSVVFVKKY  240
EVLADAENSS SDENLSGVDE PLPEIEVRIS DKDVLVRVHC EKSKGVVDKT VAELENLHLS  300
VTNSTAMSFG NSALDITIIA QMDEKFPMTV KDIVMNLRSA LKIQSV
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1174179ERKRRE
2175180RKRREK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37850.19e-64bHLH family protein