PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019169389.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

HSF

Protein Properties

Length: 381aa MW: 43646.5 Da PI: 4.967

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019169389.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	114.3	7.9e-36	15	105	2	101
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 F+ k+ye+++d+++++++sws+n++sfvv+++ efa+++Lp++Fkh+nf+SF+RQLn+YgFkkv+ e+ weF+++ F +g+ +ll++ XP_019169389.1 15 FIAKTYEMVDDSSTDSIVSWSQNNKSFVVWNPPEFARDLLPRFFKHNNFSSFIRQLNTYGFKKVDPEN---------WEFANDDFVRGEPHLLKN 100 9**************************************************************999.........************** PP XXXXX CS HSF_DNA-bind 97 ikrkk 101 i+r+k XP_019169389.1 101 IHRRK 105 *98 PP

Sequence ? help Back to Top
Protein Sequence Length: 381 aa Download sequence
MMDEDPCSIN ALPPFIAKTY EMVDDSSTDS IVSWSQNNKS FVVWNPPEFA RDLLPRFFKH 60 NNFSSFIRQL NTYGFKKVDP ENWEFANDDF VRGEPHLLKN IHRRKPVYSH SAQNLHGHSS 120 PLTESERRRY KDDIEKLRRD KELLQSELER HVEDQRGLEL ELERVAERLS DAEKQQKSML 180 SSLARALDKP ELALGLVPQS PLPYRKRRLL GNSNLHDETA MADTQSSSSQ HLDKLLDQLE 240 SSLIFWDNIL QDVAQTELDD ESRRCADSPA ISYTQLNADT ITANTRGIDM NSEPNASPLL 300 EVPGTVTNAP TGVNDVFWEQ FLTENPGSSN VSQVQQERKD LDAKKGENDP VNHKKLWRSM 360 KNVNINSLDE QLEHNAPAEI R

Sequence ? help Back to Top

Protein Sequence Length: 381 aa Download sequence

MMDEDPCSIN ALPPFIAKTY EMVDDSSTDS IVSWSQNNKS FVVWNPPEFA RDLLPRFFKH  60
NNFSSFIRQL NTYGFKKVDP ENWEFANDDF VRGEPHLLKN IHRRKPVYSH SAQNLHGHSS  120
PLTESERRRY KDDIEKLRRD KELLQSELER HVEDQRGLEL ELERVAERLS DAEKQQKSML  180
SSLARALDKP ELALGLVPQS PLPYRKRRLL GNSNLHDETA MADTQSSSSQ HLDKLLDQLE  240
SSLIFWDNIL QDVAQTELDD ESRRCADSPA ISYTQLNADT ITANTRGIDM NSEPNASPLL  300
EVPGTVTNAP TGVNDVFWEQ FLTENPGSSN VSQVQQERKD LDAKKGENDP VNHKKLWRSM  360
KNVNINSLDE QLEHNAPAEI R

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G18880.1	1e-100	HSF family protein