PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_019169051.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
|
||||||||
Family | MYB | ||||||||
Protein Properties | Length: 283aa MW: 32005.5 Da PI: 9.9326 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 42.7 | 1.3e-13 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+W++ Ed l +++ +G g+W++ ++ g+ R++k+c++rw +yl XP_019169051.1 14 KGPWSAKEDSMLTTYIQHHGVGHWRSLPKNAGLLRCGKSCRLRWMNYL 61 79******************************99************97 PP | |||||||
2 | Myb_DNA-binding | 56.8 | 5.2e-18 | 67 | 112 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++T+eEd+l+v+++ + G++ W++Ia +++ gRt++++k++w+++l XP_019169051.1 67 RGNFTPEEDDLIVRLHSLIGNR-WSLIAGRLP-GRTDNEIKNYWNTHL 112 89********************.*********.************996 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 283 aa Download sequence |
MGRAPCCSKV GLKKGPWSAK EDSMLTTYIQ HHGVGHWRSL PKNAGLLRCG KSCRLRWMNY 60 LRPGIKRGNF TPEEDDLIVR LHSLIGNRWS LIAGRLPGRT DNEIKNYWNT HLLKKLKSAG 120 FESKPRKTSR TIPKKKKKTA KPDKTRSEKR KKLRHVSKPD VGNGIQDRPE MIKVYAPRPI 180 RLSTGFARNY SFDDLATSAA SSSSGNNKAT LNDNGNNNNN GEELTVIPWH LYEVGDDLLD 240 DYMDGCDLSA RYSLPTSDTL MEKVYDEYLQ LLSEDCCLQT CSS |
Nucleic Localization Signal ? help Back to Top | |||
---|---|---|---|
No. | Start | End | Sequence |
1 | 134 | 152 | KKKKKTAKPDKTRSEKRKK |
2 | 134 | 153 | KKKKKTAKPDKTRSEKRKKL |
3 | 135 | 153 | KKKKKTAKPDKTRSEKRKK |
4 | 135 | 154 | KKKKKTAKPDKTRSEKRKKL |
5 | 136 | 154 | KKKKKTAKPDKTRSEKRKK |
6 | 136 | 155 | KKKKKTAKPDKTRSEKRKKL |
7 | 137 | 156 | KKKKKTAKPDKTRSEKRKKL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G22640.1 | 2e-62 | MYB family protein |