PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019168909.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family HSF
Protein Properties Length: 301aa    MW: 35073.6 Da    PI: 5.5343
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019168909.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind101.57.7e-32301212102
                     HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS
    HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 
                     F++k+y ++e+++++ ++sw+++gn fv++d ++fa ++Lp yFkh+ f+S++ QLn+YgFkkv+ e+          eF+h++F+kg+k+ l++
  XP_019168909.1  30 FVRKTYAMVENHQTDGIVSWNSTGNGFVIWDAHKFAAEILPCYFKHNTFSSYICQLNTYGFKKVSWER---------YEFHHEWFRKGRKRWLKN 115
                     9*****************************************************************99.........78**************** PP

                     XXXXXX CS
    HSF_DNA-bind  97 ikrkks 102
                     i+r++s
  XP_019168909.1 116 IRRRRS 121
                     ***987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 301 aa     Download sequence    
MLVLGKDSGE KSSNGEDRAQ PRAAVSPTPF VRKTYAMVEN HQTDGIVSWN STGNGFVIWD  60
AHKFAAEILP CYFKHNTFSS YICQLNTYGF KKVSWERYEF HHEWFRKGRK RWLKNIRRRR  120
SGRTDRPARS QDHQQHQQNG EEMSVLRMEK EIEEMQGVQR EILMEIKRLQ EQQEILAKEL  180
VGMIKNAPSL GGTRRQLPKI MAESLLESIS ELDNSGVVEE KEIYDPNGKI PEGEEEDEEV  240
QKDTREMARL ETYDGLNMEK LVEERPDIVI GLDDLFEGPV DWRNYIKQLG EKATDNLRIM  300
P
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G32330.13e-35HSF family protein