PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019168897.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | ERF | ||||||||
Protein Properties | Length: 222aa MW: 24910 Da PI: 6.4011 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 58.1 | 2.2e-18 | 129 | 179 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr+++ +g++ AeIrd k +r++lg+f+ta++Aa a+++a+++++g XP_019168897.1 129 HYRGVRRRP-WGKYGAEIRDS---SrKGARVWLGTFDTAKDAAMAYDKAALRIRG 179 8********.**********3...2234*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 222 aa Download sequence |
MDGEREQQQV ASEAILENVW ANFIAKGEAE GNGKENWEQL PNLDGGDVSS MEKVLLQRLP 60 SLGRWISMGA EAWEQLLDGI VVPCNDNKLV SNMVSEHDFK HHEELSSCSS STCNGELEKR 120 VEKKVVEKHY RGVRRRPWGK YGAEIRDSSR KGARVWLGTF DTAKDAAMAY DKAALRIRGP 180 KAHLNFPFKT VTKALEISCL PEINNDSQGS YHEHGEITCN PK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G18450.1 | 2e-32 | ERF family protein |