PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019168870.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | GRF | ||||||||
Protein Properties | Length: 395aa MW: 43035.8 Da PI: 8.5567 | ||||||||
Description | GRF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRC | 78.2 | 7.8e-25 | 136 | 179 | 1 | 44 |
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkske 44 d+ep+rCrRtDGKkWRCsr+vl+++k+CErH h++r rsrk++e XP_019168870.1 136 DPEPWRCRRTDGKKWRCSRDVLPDQKYCERHAHKNRPRSRKPVE 179 79***************************************987 PP | |||||||
2 | QLQ | 49.2 | 1.6e-17 | 85 | 118 | 3 | 36 |
QLQ 3 FTaaQlqlLksQilAyKyLaanqPvPpeLlqaiq 36 FTa+Q q++++Q l+yKy++a++PvPp+Ll +++ XP_019168870.1 85 FTASQRQEFERQSLIYKYMMASVPVPPQLLIPLP 118 ******************************9997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 395 aa Download sequence |
MGSRERSGKL AGLGEHDDDS SSYRCTKKTT RLNRQFQFSP SETEGSCFGD GGNGTSAAPA 60 GGPIFFNSAA PLTGGSMGSE KAVVFTASQR QEFERQSLIY KYMMASVPVP PQLLIPLPKT 120 QSNKSGLDLK FPAGSDPEPW RCRRTDGKKW RCSRDVLPDQ KYCERHAHKN RPRSRKPVEI 180 QSHKNSPNHN NNYPVTVPSF QFPATASCDQ NRSNEWFARQ KQQFVLSPPP STLGYTIGNA 240 INMNTSSLYR PELSSNEQGF VNPNLFLEGH EARSHQVNSA FLSHNMAFLQ ANAGIVHPTQ 300 HFIDGLDNTD HNSLSCKSSD RKLPFCSFRL SVPGGGEDNH HQGLSVGMLN PESQSSSSIM 360 PGGPLGEALC LGTASNLPSP HGYSNSSGTS SCSLI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G37740.1 | 8e-28 | GRF family protein |