PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019168802.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | Trihelix | ||||||||
Protein Properties | Length: 340aa MW: 37879.6 Da PI: 6.2713 | ||||||||
Description | Trihelix family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | trihelix | 71.1 | 2.1e-22 | 41 | 134 | 1 | 86 |
trihelix 1 rWtkqevlaLiearremeerlrrgk.........lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 rWt+ e+l+Lie+++ e+r r + ++kp+W+ vs+++++ g++r+p+qC+++w+nl ++kki+++e + ++e+ s + + ++l+ XP_019168802.1 41 RWTRPETLVLIEGKKIAEDRRRG-CgassvldcaQIKPKWDLVSSYCKQNGVNRGPVQCRKRWSNLISDFKKIRTWELQVKEERDSYWMMMNDLR 134 8*************988887773.2234466666**********************************************999999**9999986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 340 aa Download sequence |
MASGSIEMNK NGLSSTSSIV VGEELRNEVV DDKNKTCRHP RWTRPETLVL IEGKKIAEDR 60 RRGCGASSVL DCAQIKPKWD LVSSYCKQNG VNRGPVQCRK RWSNLISDFK KIRTWELQVK 120 EERDSYWMMM NDLRKVGKLP GFFDREIYDV LEGKAFIAAE HQLAVVTLGT DANTGNHMET 180 GEGGDEVQDN GKAQQVLGSG HHKTADSVNL SDFEPTPQWN GDDSTEEGIT PDKPTITIPS 240 PVSISGTAKG EQSGSHFWKG PPLQKGVKRR RLFSDCCENS NLEDCLAKVM ERNSNMLNAE 300 LEARNMNVQL DREQCKEQSE SLVAALNKIG DALVRIADKL |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 268 | 272 | KRRRL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G33550.1 | 1e-69 | Trihelix family protein |