PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019168798.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family Trihelix
Protein Properties Length: 355aa    MW: 39579.6 Da    PI: 6.5132
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019168798.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix712.3e-2241134186
        trihelix   1 rWtkqevlaLiearremeerlrrgk.........lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                     rWt+ e+l+Lie+++  e+r r  +         ++kp+W+ vs+++++ g++r+p+qC+++w+nl  ++kki+++e + ++e+ s + + ++l+
  XP_019168798.1  41 RWTRPETLVLIEGKKIAEDRRRG-CgassvldcaQIKPKWDLVSSYCKQNGVNRGPVQCRKRWSNLISDFKKIRTWELQVKEERDSYWMMMNDLR 134
                     8*************988887773.2234466666**********************************************999999**9999986 PP

Sequence ? help Back to Top
Protein Sequence    Length: 355 aa     Download sequence    
MASGSIEMNK NGLSSTSSIV VGEELRNEVV DDKNKTCRHP RWTRPETLVL IEGKKIAEDR  60
RRGCGASSVL DCAQIKPKWD LVSSYCKQNG VNRGPVQCRK RWSNLISDFK KIRTWELQVK  120
EERDSYWMMM NDLRKVGKLP GFFDREIYDV LEGKAFIAAE HQLAVVTLGT DANTGNHMET  180
GEGGDEVQDN GKAQQVLGSG HHKTADSVNL SDFEPTPQWN GDDSTEEGIT PDKPTITIPS  240
PVSISAEKNC QPLRQACPYP GTAKGEQSGS HFWKGPPLQK GVKRRRLFSD CCENSNLEDC  300
LAKVMERNSN MLNAELEARN MNVQLDREQC KEQSESLVAA LNKIGDALVR IADKL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1283287KRRRL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G33550.17e-55Trihelix family protein