PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019168777.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | WRKY | ||||||||
Protein Properties | Length: 466aa MW: 49904.9 Da PI: 5.2376 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 97.7 | 7.7e-31 | 224 | 282 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 +D ++WrKYGqK++kgs++pr+YYrC+s+ gC+++k+vers++dp++++itY++eHnh+ XP_019168777.1 224 SDLWAWRKYGQKPIKGSPYPRGYYRCSSSkGCSARKQVERSRTDPNMLVITYTSEHNHP 282 699************************998****************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 466 aa Download sequence |
MCSQFQLHGM ENYQGDLADI VRGSGLAGNT AQEASPPAVP DTWQYPGSSG DNMAAAMNCY 60 SSSSDHHDFG DPFCHLRDPL MFQELAMPPP PPPSAAFFTC SDNDLDLVDT AAAAPETGTS 120 SSVFPPPKLV LDEEMKRPPA CNIFSRMLQI SPNSNLNPPA AGGGLACSEN IISASSSGNA 180 AGLQISSPRN TGSIKRRKSQ AKKVVCVPAP APANSRPSGE VVPSDLWAWR KYGQKPIKGS 240 PYPRGYYRCS SSKGCSARKQ VERSRTDPNM LVITYTSEHN HPWPTQRNAL AGSTRAQAAK 300 NAAAAATKSS ISQTPTPPTT NDTQTDHHTM SDTPPVKEET TTAAEDRDGD DNPHHVMQMD 360 EFPGGFPQSY KPALPSAGDN DDDVTTHHHH HPEDFFADLG EIESTDPLNL MFSQGFPSGQ 420 EKKAAAAGIA IDDAFNFYDW TTTTPTDNNN NSIQTLGKSD SGQRGL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G30650.1 | 9e-81 | WRKY family protein |