PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019168755.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | ERF | ||||||||
Protein Properties | Length: 234aa MW: 26300.6 Da PI: 8.2541 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 56.8 | 5.4e-18 | 59 | 107 | 2 | 54 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkle 54 +++GVr+++ +g+Wv+eIr+p +r++lg++ tae+Aa+a+++a++ + XP_019168755.1 59 RFRGVRQRH-WGSWVSEIRHP-----LlkTRIWLGTYETAEDAARAYDEAARLMC 107 69******9.**********8.....334**********************8775 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 234 aa Download sequence |
MLTKTPELFT PISSSYSAHH TFSPTLPLLL PSLRHFHKHL QHHCRVSRSL SAMARPQQRF 60 RGVRQRHWGS WVSEIRHPLL KTRIWLGTYE TAEDAARAYD EAARLMCGQM ARTNFPYNAG 120 DHQSSSSSRK FLSANLIAKL QRCQMTSHSV AKRPTAQARA PEQEYPPPAV SRGDGAPANN 180 LAQSGAETVE NWVGCQGQEG SGQEFKALED HHIEQMIEEL LDYGSIELCS VLQE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G25190.1 | 8e-51 | ERF family protein |