PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019168728.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | ERF | ||||||||
Protein Properties | Length: 326aa MW: 35844.6 Da PI: 5.8908 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 62.4 | 1e-19 | 120 | 169 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr+++ +g+W+AeIrdp r r +lg+++taeeAa +++a+ +l+g XP_019168728.1 120 KYRGVRQRP-WGKWAAEIRDPL----RrVRLWLGTYDTAEEAAMVYDHAAIRLRG 169 8********.**********72....45*************************99 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 326 aa Download sequence |
MLSSTVKYSE HRHQVSMVRS LPSGRRNLPE IGGGGWPRVV RISVTDGDAT DSSDEDEEKG 60 RRRVKRYVTE LRILPCGRGD GNGDSDGVLK TEGTAAAAAA KRRKKSAESR LKAAGNNARK 120 YRGVRQRPWG KWAAEIRDPL RRVRLWLGTY DTAEEAAMVY DHAAIRLRGP DALTNFSVPT 180 TAPPDVKPEP ADSGNNSGDD SHHQLSPKSV LRFASASNGD SPHQDQAVKM YHTPSSPENL 240 STFSSPFDTL FPNDFFQFED PLSVPVPVPG LFDEMGLSNY IFEEACSDNT FIGSSHEFGS 300 EQPAWPADNY FQEFGDIFGS DPLVAL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G23750.1 | 3e-51 | ERF family protein |