PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019168584.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | ERF | ||||||||
Protein Properties | Length: 229aa MW: 24702.5 Da PI: 10.2494 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 59.9 | 6.1e-19 | 21 | 71 | 2 | 56 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkklege 56 +y+GVr ++ +g+++AeIrdp r +r++lg+f taeeAa+a+++a+++++g+ XP_019168584.1 21 RYRGVRKRP-WGKYAAEIRDPA----RrTRVWLGTFETAEEAARAYDKAAREFRGA 71 69*******.**********82....35*************************985 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 229 aa Download sequence |
MAPKKAAARR VNPAEQNEEV RYRGVRKRPW GKYAAEIRDP ARRTRVWLGT FETAEEAARA 60 YDKAAREFRG AKAKTNFAPP LGDHQFPLGN FGKKNNSHNQ SPSHSSTVES SGRDGGIFSP 120 TPPDLALRGP AAITAGWFPS MNYHPPSGSP IFPVGYNPPA VNLSGQMFYL DALARGGTAN 180 PPPNRQLETV DFLGGAGTPT ESDSSSIINN QPKKGGLNLD LNLPPPENS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G15210.1 | 3e-23 | ERF family protein |