PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019167946.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | MYB | ||||||||
Protein Properties | Length: 230aa MW: 26850 Da PI: 7.7668 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 54.9 | 2.1e-17 | 8 | 55 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+W +eEde+l+ av+ lG ++W++ a+ g++Rt+k+c++rw +yl XP_019167946.1 8 KGPWLEEEDEKLAAAVASLGERRWDALAKASGLRRTGKSCRLRWMNYL 55 79********************************************97 PP | |||||||
2 | Myb_DNA-binding | 52.7 | 1e-16 | 61 | 105 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 r r TteE++l++++ +++G++ W++Ia+ ++ gRt++++k++w+ + XP_019167946.1 61 RSRITTEEELLIIELQRKWGNK-WAKIAKQLP-GRTDNDIKNYWRGH 105 6799******************.*********.***********966 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 230 aa Download sequence |
MEKETLRKGP WLEEEDEKLA AAVASLGERR WDALAKASGL RRTGKSCRLR WMNYLRSNIK 60 RSRITTEEEL LIIELQRKWG NKWAKIAKQL PGRTDNDIKN YWRGHLRKKI LREQECFKNT 120 SNKAQQMNTS WRSCTTADRA SFKDGSLGSS VDSSEVVELP DYALVSSPYE ERLWDWMSSW 180 SHEDSEMEHH GDGESCSRNQ WCCHPRWTSD YSCIGTIWDY ASSSIWDNTS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G53200.1 | 1e-48 | MYB family protein |