PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019167927.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

CPP

Protein Properties

Length: 859aa MW: 92929.3 Da PI: 7.5765

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019167927.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	48.4	1.9e-15	461	499	3	41
TCR 3 kkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNkee 41 +k+CnCk+skClk+YC+Cfaag +C+e C C++C+N+ e XP_019167927.1 461 CKRCNCKRSKCLKLYCDCFAAGIYCAEPCACQGCFNRPE 499 79**********************************876 PP
2	TCR	49.2	1e-15	548	586	1	39
TCR 1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNk 39 ++k+gCnCk+s ClkkYCeC++a++ Cs+ C+Ce+CkN XP_019167927.1 548 RHKRGCNCKRSMCLKKYCECYQANVGCSSGCRCEGCKNV 586 589***********************************6 PP

Sequence ? help Back to Top
Protein Sequence Length: 859 aa Download sequence
MDSPVPSKTT STPTSAAAVS SSSSSVSESA AVQESPFSNY LSSLSPIGPV KTAIVVQDFP 60 GIITPPHVFT SPRINPRIAS SFLERGPFLQ LPNEEFSVKD DSQNNISTLR DRAGSSNTQL 120 NSGFVPHTDK VSDNNSPVQE QAESQPICVD DFLVDAAKLG SVDSKNSSLQ QADGLIGSKE 180 SVDLKGKEIK NNNEMATGDI NSKKTNGKKR VDDAESVPSS KMQPNSSLEN QYDYRGTSEA 240 GEHQRGVFRR CLQFEDVQPK TALTPDPCNL SESVNCSNSA VSPIALEGLE SFPLNTPTAQ 300 SSKQFGDTQN TENSSFKTPK PSGIGLHLNS IVSTVQGGSG ATVSMKSAER GNFSLHGKKL 360 MSMTSHLEKS KKCLISSNVG EDILASIEES SLQGESSAPL PLHSVKPIDS IASLKPMKCL 420 STPGNKRKSS SENIDGTSAS NQSSPKKKRK KTSDASDGDG CKRCNCKRSK CLKLYCDCFA 480 AGIYCAEPCA CQGCFNRPEY EDTVLETRQQ IESRNPLAFA PKVVQHMTDS HSNIVGDIGV 540 SFTPSSARHK RGCNCKRSMC LKKYCECYQA NVGCSSGCRC EGCKNVYGQK EEYGRIKTLV 600 KKLGTFEQTE LSNPHNLTPL TPSFQCSDHR NDSSKSWFTS GRCSQSPESG HTPLIPRYEV 660 SKKGFTKSSD NPESIEETTD IMDLVSFDPG VEDNNSAAVN EYSPGEMNQL VVLPNSQQWV 720 NDSREHLYAG TCHLSSTSSF GWRSSPMTQY DGTKEFYESI NSDKSSFNAI EDDTPEILKD 780 ASTPPRGVKV SSPNKKRVSP PHDRLKDPDG SSSARRLKAG RKYKLGSVPS FPPLTPCFVS 840 KGSSEGQIKN DPQKPSSST

Sequence ? help Back to Top

Protein Sequence Length: 859 aa Download sequence

MDSPVPSKTT STPTSAAAVS SSSSSVSESA AVQESPFSNY LSSLSPIGPV KTAIVVQDFP  60
GIITPPHVFT SPRINPRIAS SFLERGPFLQ LPNEEFSVKD DSQNNISTLR DRAGSSNTQL  120
NSGFVPHTDK VSDNNSPVQE QAESQPICVD DFLVDAAKLG SVDSKNSSLQ QADGLIGSKE  180
SVDLKGKEIK NNNEMATGDI NSKKTNGKKR VDDAESVPSS KMQPNSSLEN QYDYRGTSEA  240
GEHQRGVFRR CLQFEDVQPK TALTPDPCNL SESVNCSNSA VSPIALEGLE SFPLNTPTAQ  300
SSKQFGDTQN TENSSFKTPK PSGIGLHLNS IVSTVQGGSG ATVSMKSAER GNFSLHGKKL  360
MSMTSHLEKS KKCLISSNVG EDILASIEES SLQGESSAPL PLHSVKPIDS IASLKPMKCL  420
STPGNKRKSS SENIDGTSAS NQSSPKKKRK KTSDASDGDG CKRCNCKRSK CLKLYCDCFA  480
AGIYCAEPCA CQGCFNRPEY EDTVLETRQQ IESRNPLAFA PKVVQHMTDS HSNIVGDIGV  540
SFTPSSARHK RGCNCKRSMC LKKYCECYQA NVGCSSGCRC EGCKNVYGQK EEYGRIKTLV  600
KKLGTFEQTE LSNPHNLTPL TPSFQCSDHR NDSSKSWFTS GRCSQSPESG HTPLIPRYEV  660
SKKGFTKSSD NPESIEETTD IMDLVSFDPG VEDNNSAAVN EYSPGEMNQL VVLPNSQQWV  720
NDSREHLYAG TCHLSSTSSF GWRSSPMTQY DGTKEFYESI NSDKSSFNAI EDDTPEILKD  780
ASTPPRGVKV SSPNKKRVSP PHDRLKDPDG SSSARRLKAG RKYKLGSVPS FPPLTPCFVS  840
KGSSEGQIKN DPQKPSSST

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	447	451	KKRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G14770.1	2e-63	CPP family protein