PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019167895.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family ERF
Protein Properties Length: 203aa    MW: 22545.8 Da    PI: 4.3003
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019167895.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP256.18.9e-181362255
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    +ykGVr +k +g+Wv+eIr p++   r r++lg++ tae+Aa+a + a  +l+g
  XP_019167895.1 13 KYKGVRKRK-WGKWVSEIRLPNS---RERIWLGSYNTAEKAARAFDVAQFCLRG 62
                    8*****999.**********933...5*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 203 aa     Download sequence    
MERNEEAPAP AVKYKGVRKR KWGKWVSEIR LPNSRERIWL GSYNTAEKAA RAFDVAQFCL  60
RGPTAQLNFP DDPPDVPGWQ TFTPPEIQDV AAQYGSDYAR PPPANIAAVG QEQGNNEEEI  120
THVMDLDDTS PSSTSEGAIQ MGDIDWSFFD ALDGATTCND FGLFSGDIYM PPQPHPSPPP  180
PPPPATDHDN ETHFSHSSFL WNF
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
11521KGVRKRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G74930.14e-45ERF family protein