PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_019167833.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
|
||||||||
Family | FAR1 | ||||||||
Protein Properties | Length: 406aa MW: 47263.9 Da PI: 7.8592 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 63.8 | 4.7e-20 | 57 | 149 | 1 | 90 |
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk....tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 +fY+eYAke+GF+vr +++++ r g++ + + Cs+eg+++e+k+ t+k+rr+r+++r+gCka+++++k+++g+++v+ ++l+H+ l+ XP_019167833.1 57 EFYEEYAKEAGFDVRHGTKRRN-RFGQVSIKYMLCSREGYKAERKEPnnssTVKQRRRRVSNRIGCKARIVMTKSDKGRYKVHAIQLKHTNCLC 149 6*****************9999.66669999999********99988889999************************************87666 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 406 aa Download sequence |
MENTGTAFPG DAHCAEHVME CEMEIHKDGA KYWTPPTTKE KTPFEGQRFE TVEDGIEFYE 60 EYAKEAGFDV RHGTKRRNRF GQVSIKYMLC SREGYKAERK EPNNSSTVKQ RRRRVSNRIG 120 CKARIVMTKS DKGRYKVHAI QLKHTNCLCS DAAKPFLKIN RQLDIGHKTF LAHCAKANIG 180 PTKAFRLFKE MVGSFTDVGA TCIDFCNFRR DLLAYIAEAD AQMVIEDMFK RKEDNPDFYF 240 DFDIDDEAQL TRLFWADAEC RRNYAYYGDV MSFDATYSTN RYKLVFVPFT GVDNHKRCIT 300 FGAGLIAEED VESYEWLVMK FKTAMEYTPR FTTTDQDPAL KIVVPHIMPT TRHRFCMWHI 360 MAKVGEKVGV ALLQNADFKK ELNNTVWDDT LTVDEFERRW TRLMKD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT4G38180.1 | 1e-57 | FAR1 family protein |