PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019167785.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family WRKY
Protein Properties Length: 291aa    MW: 31973.2 Da    PI: 7.2091
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019167785.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY971.2e-30137196159
                     ---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                     ++Dgy+WrKYGqK+ ++++ pr+YY+C++a +Cpvkkkv+rs edp++++ +YegeHnh+
  XP_019167785.1 137 VKDGYQWRKYGQKVTRDNPSPRAYYKCSFApSCPVKKKVQRSVEDPSILIAIYEGEHNHP 196
                     58***************************99****************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 291 aa     Download sequence    
MDYFSSSLAD KSLAIDLNTS INMDCEAADT SGNSNSYVGD QKHGLLMEEL KETKMENKKL  60
TAMLTVVCEN YCTLQTHFLG LLHTHGADDQ LLGKRKADDG DCCGAAAASS PKRPRETRTP  120
VSRVRVKTDP SDMSLVVKDG YQWRKYGQKV TRDNPSPRAY YKCSFAPSCP VKKKVQRSVE  180
DPSILIAIYE GEHNHPHPTQ PELLSVPLPQ GFTPQSICSP VSDVENSSSP ARLDIRAKVQ  240
RSLTSLDTVE LQHFLAEKMA SSLTKNRGFT NALAAAISDR ILVDHALADS C
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G80840.11e-51WRKY family protein