PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019167607.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family Dof
Protein Properties Length: 284aa    MW: 31122.5 Da    PI: 7.4719
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019167607.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof128.52e-403696363
          zf-Dof  3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkksss 63
                    e+alkcprC+stntkfCyynnyslsqPryfCk+CrryWtkGG+lrnvPvGgg+rknk+sss
  XP_019167607.1 36 EQALKCPRCESTNTKFCYYNNYSLSQPRYFCKSCRRYWTKGGTLRNVPVGGGCRKNKRSSS 96
                    7899*****************************************************9875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 284 aa     Download sequence    
MDPSSAQEMS SQTLESMLGC TKAQQGQEKK PRPADEQALK CPRCESTNTK FCYYNNYSLS  60
QPRYFCKSCR RYWTKGGTLR NVPVGGGCRK NKRSSSSASS RSRSQDQSLC SSPVPLPSLA  120
GLPYEASDLS LALARLQKQA NLGVGGEHEM GGIMCNPNNT PYDILGNHHH HGGFLETPAA  180
NASFHNLYSY GNINVENGEM GILPYEEHHL GGGAVKQEMG SAREEGEISN RVLWSFPWQQ  240
MGGDQANNNM GDQIDSSKQN WYGYGYGFGS SSSSWHGLLN SPLM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28510.13e-40Dof family protein