PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019167102.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

Dof

Protein Properties

Length: 470aa MW: 51033.4 Da PI: 5.6985

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019167102.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	123.3	8e-39	142	202	2	62
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 ++k+l+cprC+s++tkfCyynny+++qPr+fC++C+ryWt+GG++rn+PvG+grrknk+s XP_019167102.1 142 PDKILPCPRCNSMDTKFCYYNNYNVNQPRHFCRSCQRYWTAGGSMRNLPVGAGRRKNKSSA 202 7899******************************************************976 PP

Sequence ? help Back to Top
Protein Sequence Length: 470 aa Download sequence
MGEQKDPGIT LFGKKIPLPL RVVVFAGDES AGGDSGGVNF PGESNSGSER VRCFDDENIE 60 DAYEESKPED EMASETISEE KDEDGDEDQN MDGKESCKAL QELGNKTEAP SADDNSPTAK 120 STKTEDDQTG TDNSKEKTLK KPDKILPCPR CNSMDTKFCY YNNYNVNQPR HFCRSCQRYW 180 TAGGSMRNLP VGAGRRKNKS SASHCHITIS NANVSDALHA MQPEAPNGFH FPAHLKPDAT 240 VLSFSPNASL RECMGSVLNP GETKSPNGTQ NGFSKPHTRN PSYKTGNDCS TKSSVTNSNS 300 KAEYLPKVPW NAAASLPPVF PSGVPVTFCP ATYWNYCLPG PWTLPWLTPP SPTVSQKSSI 360 SSPNSLGKHP RDGDLLEPNN PKGKESSEQK SPEGRILVPK TLRIDDPDEA AKSSIWATLG 420 IKYNSISKGS MFNALEEQKS DDKNHTTSAS MALQANPAAL SRSLTFQESI

Sequence ? help Back to Top

Protein Sequence Length: 470 aa Download sequence

MGEQKDPGIT LFGKKIPLPL RVVVFAGDES AGGDSGGVNF PGESNSGSER VRCFDDENIE  60
DAYEESKPED EMASETISEE KDEDGDEDQN MDGKESCKAL QELGNKTEAP SADDNSPTAK  120
STKTEDDQTG TDNSKEKTLK KPDKILPCPR CNSMDTKFCY YNNYNVNQPR HFCRSCQRYW  180
TAGGSMRNLP VGAGRRKNKS SASHCHITIS NANVSDALHA MQPEAPNGFH FPAHLKPDAT  240
VLSFSPNASL RECMGSVLNP GETKSPNGTQ NGFSKPHTRN PSYKTGNDCS TKSSVTNSNS  300
KAEYLPKVPW NAAASLPPVF PSGVPVTFCP ATYWNYCLPG PWTLPWLTPP SPTVSQKSSI  360
SSPNSLGKHP RDGDLLEPNN PKGKESSEQK SPEGRILVPK TLRIDDPDEA AKSSIWATLG  420
IKYNSISKGS MFNALEEQKS DDKNHTTSAS MALQANPAAL SRSLTFQESI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G39660.1	5e-75	Dof family protein