PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019166940.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family FAR1
Protein Properties Length: 284aa    MW: 31746.9 Da    PI: 6.2552
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019166940.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR159.31.3e-1882169291
            FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 
                      Yn YA++v Fsvrk +++++  +++i +++f C k g++e+ ++    +   +   r gC a ++     d+ w v+k ++eHnHel++
  XP_019166940.1  82 LYNGYAYRVSFSVRKGQQRYKASTKSIQMKRFFCAKAGYKEKPNSG--VKLYLKIDIRNGCGALVQFGVGGDEMWTVIKHVKEHNHELCS 169
                     7***************************************999887..8888999*********************************95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 284 aa     Download sequence    
MEETAVRGED SIGDLISVIP MNEDFVGDSI STDKAELNID IAGPSSSPCS FISLCIMNVV  60
SGSFDEDLVG VVVSNGDEAF ELYNGYAYRV SFSVRKGQQR YKASTKSIQM KRFFCAKAGY  120
KEKPNSGVKL YLKIDIRNGC GALVQFGVGG DEMWTVIKHV KEHNHELCSF GKSHLLRSHR  180
RVGNNHLEYL KDMKNSGVAL ADGMRFLKRQ SGGSPLVGFT NRDAYNLMTS ESLKCLDGTD  240
SNSLIEIFKR RQSNEVDFFF DFEVDLDGRL CSFFLERWSN EKGL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.13e-15FAR1 family protein