PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019166846.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

bZIP

Protein Properties

Length: 312aa MW: 33975.6 Da PI: 6.1024

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019166846.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	54.1	3.4e-17	133	188	3	61
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklks 61 ++kr +r+++NRe+ArrsR+RK++++ eLe+ v++L +eN +L k+l + +++ k+ XP_019166846.1 133 DVKRIKRMASNRESARRSRRRKQEQLGELENQVDQLRGENASLFKQL---ADAAQQYKD 188 68***************************************999555...555554444 PP

Sequence ? help Back to Top
Protein Sequence Length: 312 aa Download sequence
MKKSPSEQAL AELFGGKNGG DNKDISSGDQ HPSILLINQD VMHGLSSSFN PLSDHVNFWP 60 KKTTPSHACI VGPGDAQSST CVGFRNSTIK QHRSENQMTG AVSGSSHELW EEDDDLEVEE 120 GGACEQSVVN NTDVKRIKRM ASNRESARRS RRRKQEQLGE LENQVDQLRG ENASLFKQLA 180 DAAQQYKDSS TNNRVLKSDV EALRAKVKLA EDMVARGSVN SSLTHLIQNC LTARATVLGN 240 NACRLDNNMS STMISVPEGH DSSSVLQRVA IQGPTPTMGL QNNVDSYTDS NLKNNNSGVI 300 SEVVSCVSDM WS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	148	155	RRSRRRKQ
2	150	155	SRRRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G24800.1	2e-36	bZIP family protein