PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019166649.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family WRKY
Protein Properties Length: 258aa    MW: 28385.3 Da    PI: 6.4028
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019166649.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY93.31.7e-2970128259
                     --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                      D ++WrKYGqK++kgs++pr+YY+C+s+  Cp++k+ve+s++dp+v+ +tY  eHnh+
  XP_019166649.1  70 ADSWAWRKYGQKPIKGSPHPRGYYKCSSSkACPARKQVEKSRSDPNVLLVTYFCEHNHP 128
                     69*************************9989***************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 258 aa     Download sequence    
MVGRFDQTHP SPPEQDDSDT SPENSADSPV SGTDHDTKIT KVSFPKRRKS GQKRVTSVTI  60
NGGEISIPPA DSWAWRKYGQ KPIKGSPHPR GYYKCSSSKA CPARKQVEKS RSDPNVLLVT  120
YFCEHNHPRP AARKAAATAP DAAVSDDTMR RRATSDHSSQ SEGDSGERVA ATCHKSPLAA  180
GNEVDWFLNF EPATPFAILD ESPMMTQTKV TDTDDVPPPP PPPPAVFPNR VEEDESLFAD  240
LGELPEFSRG FRRDWGER
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G29280.11e-45WRKY family protein