PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019166399.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

bZIP

Protein Properties

Length: 448aa MW: 48127.5 Da PI: 9.5875

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019166399.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	45.1	2.1e-14	371	424	5	58
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevak 58 +r rr++kNRe+A rsR+RK+a++ eLe +v++L++ N++L+k+ el ++ ++ XP_019166399.1 371 RRRRRMIKNRESAARSRARKQAYTLELEAEVAKLKEANQELRKKQTELMEMQKN 424 689*********************************************999765 PP

Sequence ? help Back to Top
Protein Sequence Length: 448 aa Download sequence
MVKHLCWECG EKLSKEDEKM PFVFSSFPVM GSYMNFKNFG EMPLPEGNGD KPASPFPLTR 60 QSSIYSLTFD ELQTYGGLGK DLGSMNMEDL LKNIWTAEES QAIASSASAA DASIPPGGNL 120 QRQGSLTLPR TLSQKTVDEV WRDFHKETGV SKNDENGGGV SNFGQRQSTL GEMTLEEFLA 180 RAGVVREDIQ VQPNGVGLSG GLSQLNSIAF QQPAQNPGGG LSKQIAENGK NAAIPGPSNL 240 MMNAGGTQSS QLQLPLFSKQ TTVAFASPMQ LGNTAQLASP RVGGGPIVGM SSPLNTSLAQ 300 GSVMQGGAMR MAGLCNGATT AIGGSPRNPL SSDIVTKSNL DTSSLSPSPF AFNEGGRGRK 360 ACGSLEKVVE RRRRRMIKNR ESAARSRARK QAYTLELEAE VAKLKEANQE LRKKQTELME 420 MQKNENEKVN MPWGGKSRCL RRTVTGPL

Sequence ? help Back to Top

Protein Sequence Length: 448 aa Download sequence

MVKHLCWECG EKLSKEDEKM PFVFSSFPVM GSYMNFKNFG EMPLPEGNGD KPASPFPLTR  60
QSSIYSLTFD ELQTYGGLGK DLGSMNMEDL LKNIWTAEES QAIASSASAA DASIPPGGNL  120
QRQGSLTLPR TLSQKTVDEV WRDFHKETGV SKNDENGGGV SNFGQRQSTL GEMTLEEFLA  180
RAGVVREDIQ VQPNGVGLSG GLSQLNSIAF QQPAQNPGGG LSKQIAENGK NAAIPGPSNL  240
MMNAGGTQSS QLQLPLFSKQ TTVAFASPMQ LGNTAQLASP RVGGGPIVGM SSPLNTSLAQ  300
GSVMQGGAMR MAGLCNGATT AIGGSPRNPL SSDIVTKSNL DTSSLSPSPF AFNEGGRGRK  360
ACGSLEKVVE RRRRRMIKNR ESAARSRARK QAYTLELEAE VAKLKEANQE LRKKQTELME  420
MQKNENEKVN MPWGGKSRCL RRTVTGPL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G45249.1	2e-79	bZIP family protein