PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019166375.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family WRKY
Protein Properties Length: 308aa    MW: 33075.1 Da    PI: 5.4169
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019166375.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY104.26.9e-33169226259
                     --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                     +Dgy+WrKYGqK vk+s+fprsYYrCt ++C+vkk+vers+edp++v++tYeg+H h+
  XP_019166375.1 169 EDGYRWRKYGQKAVKNSPFPRSYYRCTNTKCTVKKRVERSSEDPTIVITTYEGQHCHH 226
                     8******************************************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 308 aa     Download sequence    
MDEDKGKVDR GVDDFATDSS WALGGGGDSV GVYFFGGGGV EKDESNILGD FGWSFQEEEE  60
HGGGGGGGGF SSRIDSDLAG NSSNDRFSVL ESATTAAATP SDATEPVAVQ AEQTCSSSSD  120
DAPEKSTASG GSTSRQPADT ASKVKKKAQK RIRQPRFAFM TKSEVDHLED GYRWRKYGQK  180
AVKNSPFPRS YYRCTNTKCT VKKRVERSSE DPTIVITTYE GQHCHHTVGF PRGGFLGEAA  240
YMSHSYPLTS QFYLPALQFP QEGSLGIPQT HQSQQGNNRD PNAAMAAPQL PPDEGLLGDI  300
VPPGIRNK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69310.26e-73WRKY family protein