PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019166258.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | SBP | ||||||||
Protein Properties | Length: 338aa MW: 36486.4 Da PI: 9.1429 | ||||||||
Description | SBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SBP | 134.1 | 4.4e-42 | 58 | 133 | 1 | 76 |
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkk 76 +CqvegC+adlse k y+++hkvC +hsk+p+v+vsgleqrfCqqCsrfh+lsefD+ krsCrrrLa+hnerrrk+ XP_019166258.1 58 RCQVEGCKADLSEFKAYYSKHKVCGMHSKSPKVIVSGLEQRFCQQCSRFHQLSEFDQVKRSCRRRLAGHNERRRKP 133 6*************************************************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 338 aa Download sequence |
MELGSSSSST STSADSSSDG LKFGKKVYFE DAGGGSGGSS LPAKRGRSAV AQGGQPPRCQ 60 VEGCKADLSE FKAYYSKHKV CGMHSKSPKV IVSGLEQRFC QQCSRFHQLS EFDQVKRSCR 120 RRLAGHNERR RKPPLGSILS THYGTLSSSM FGNNGHFVMD FASYPYPGGK GSWRPSTNGV 180 GNFLQQPWQR NSEDPPPKLL LLGSDAAARA TYPSPCGEYF NGVSDSTRAL SLLSNSNQPW 240 GSRNQQPSGL GVNSLLNTDG TLAVHPSGSH AAVINEFSSS PWGFKGNQAT TSSDKILPDS 300 HYSGELEMMA HQQTGRAYMG MEYSTGYDSS VQNVHWTL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G57920.1 | 5e-62 | SBP family protein |