PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019166230.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

Dof

Protein Properties

Length: 326aa MW: 36467.5 Da PI: 8.7821

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019166230.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	125.9	1.3e-39	121	181	2	62
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 ++k+l+cprC+s++tkfCyynny+++qPr+fCk+C+ryWt+GG++rnvPvG+grrknk+s XP_019166230.1 121 PDKILPCPRCNSKDTKFCYYNNYNVNQPRHFCKNCQRYWTAGGSMRNVPVGSGRRKNKASA 181 7899******************************************************875 PP

Sequence ? help Back to Top
Protein Sequence Length: 326 aa Download sequence
MSTEVKDPAI KLFGKTICLL RHDTLSCSIA ADQPAKRSRS SITTASHDYK NTSGEVSESK 60 QDDECRNLSG EDSVGAETTS SRMSDDDKAA QNPEKQTQCA AKKDDESETS DSQEQKNLKK 120 PDKILPCPRC NSKDTKFCYY NNYNVNQPRH FCKNCQRYWT AGGSMRNVPV GSGRRKNKAS 180 ASNFRHIMVS DALHAAQFDV KPNGTVLAFG SDNRAVNESV MNLVEKSHQR IPAWNATHQW 240 RSPVQPPMAL YGVLAPWSGR WISPDQSTPT SLKMEDEKEA VKSSIWSTFK AFNSKDGERE 300 RDRNHSLVLQ ANPAALSRSL NFQERT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G62430.1	6e-54	Dof family protein