PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019166034.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family bHLH
Protein Properties Length: 337aa    MW: 37502.1 Da    PI: 6.6914
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019166034.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH31.24e-10165212455
                     HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     +h+ +Er RR++i +++  L++l+P +    +k   Ka +L + ++Y++sLq
  XP_019166034.1 165 SHSLAERVRREKISERMKYLQDLVPGC----NKITGKAGMLDEIINYVQSLQ 212
                     8**************************....999*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 337 aa     Download sequence    
MLHSSLNRTA METGSGAAEM TVLERHQEEH QQQQQILRYL GGGNDQLVTA MFSPPPELQE  60
FQSLGDLVTR AMKPENVWTD FSGLGLGQET AIGSNYRISR TASSPPAVAD GKRKEASPPE  120
NLKRRKAEKK QSTTEQKKES SSATSDDKKP DYIHVRARRG QATDSHSLAE RVRREKISER  180
MKYLQDLVPG CNKITGKAGM LDEIINYVQS LQRQVEFLSM KLATVNPTID FNIDSFYTKE  240
VYEVSGSNYP AEMLNSLQQC SGMENGVNPS AMALRRTISA PISLLDTTAN QLQASSTWDA  300
EIQNLYAMEF QQGRSTTSFL SQPFMGFIEG GNTRMAI
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1112126KRKEASPPENLKRRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G34530.12e-59bHLH family protein