PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019166006.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family ERF
Protein Properties Length: 249aa    MW: 28444.1 Da    PI: 9.8441
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019166006.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP263.73.8e-20107155355
             AP2   3 ykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                     y+GVr+++ +g+W+AeIrdp+    +  r++lg+f taeeAa+a+++a+ +++g
  XP_019166006.1 107 YRGVRQRP-WGKWAAEIRDPR----KaVRVWLGTFKTAEEAARAYDRAAIEFRG 155
                     9*******.**********94....36************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 249 aa     Download sequence    
MHWSTQILPP EPFSTATNRS SPLTAAHQEF SIMVSALQNV MNGGDAPPDA NFDSHPRFSS  60
LPFQYTCQFC KYEGCLGCNF FAAPDARQMA KKKSNAVVMK RKKKNYYRGV RQRPWGKWAA  120
EIRDPRKAVR VWLGTFKTAE EAARAYDRAA IEFRGPRAKL NFSFADYTNT TTVSTTTLKT  180
RQKHDKSTSS SSSISQQPRQ HVQENSDLKT NWSAPAKMEL RNGDEEFQEW MMMLMDFNDV  240
SSDYILQLP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G34410.13e-36ERF family protein