PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019165966.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

bZIP

Protein Properties

Length: 470aa MW: 51172 Da PI: 7.2218

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019165966.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	31.1	5.2e-10	185	225	5	45
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL 45 k rr+++NReAAr+sR+RKka++++Le+ +L++ ++L XP_019165966.1 185 KTLRRLAQNREAARKSRLRKKAYVQQLENSRLKLTQLEQEL 225 788*************************9877777766555 PP

Sequence ? help Back to Top
Protein Sequence Length: 470 aa Download sequence
MDGSSTLKVG REGNKIVTAG MPSFISQTPV SNPMGTEGNT TQNPVISDFG VLEQYLGFRI 60 GDGANPSRRP LLSSTSGTNS LMGTDVSGAL NKNLASLSTS LSAAATGSQA LQLQRGIPTN 120 QVPLSGTTHH ENWAESQMAD SSSHTDTSTD MDADDKNQGH EMGQSAGVLA SDSSDKSKGK 180 NVDQKTLRRL AQNREAARKS RLRKKAYVQQ LENSRLKLTQ LEQELQRARQ QGIFISSSGD 240 QSHGAGTNGA LAFDVEYGRW LEEQNRHINE LRTAVNAHAS DTDLRTIADN VKAHFDEIYR 300 LKGNAAKADV FHVLSGMWKT PAERCFMWIG GFRPSELLKL LVNQLEPLTE QQSEGIYSLQ 360 QSSHEAEDAL SQGMDALQQS LAETLAKGAS GPEGSSGNVA NYMGQMAMAM GKLGTLEGFL 420 RQADNLRQQT LQQMHRVLTT RQSARSLLAI HDYFSRLRAL SSLWLARPHE

Sequence ? help Back to Top

Protein Sequence Length: 470 aa Download sequence

MDGSSTLKVG REGNKIVTAG MPSFISQTPV SNPMGTEGNT TQNPVISDFG VLEQYLGFRI  60
GDGANPSRRP LLSSTSGTNS LMGTDVSGAL NKNLASLSTS LSAAATGSQA LQLQRGIPTN  120
QVPLSGTTHH ENWAESQMAD SSSHTDTSTD MDADDKNQGH EMGQSAGVLA SDSSDKSKGK  180
NVDQKTLRRL AQNREAARKS RLRKKAYVQQ LENSRLKLTQ LEQELQRARQ QGIFISSSGD  240
QSHGAGTNGA LAFDVEYGRW LEEQNRHINE LRTAVNAHAS DTDLRTIADN VKAHFDEIYR  300
LKGNAAKADV FHVLSGMWKT PAERCFMWIG GFRPSELLKL LVNQLEPLTE QQSEGIYSLQ  360
QSSHEAEDAL SQGMDALQQS LAETLAKGAS GPEGSSGNVA NYMGQMAMAM GKLGTLEGFL  420
RQADNLRQQT LQQMHRVLTT RQSARSLLAI HDYFSRLRAL SSLWLARPHE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G12250.5	1e-147	bZIP family protein