PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019165690.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family bHLH
Protein Properties Length: 291aa    MW: 32377.3 Da    PI: 5.3685
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019165690.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH40.64.5e-1395140855
                     HHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   8 rErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                      Er RR+++++ f +L+ llP+++  +  K++K++iL +Av++Ik L+
  XP_019165690.1  95 TERERRKKMRDMFTNLQALLPHQF--HPNKVDKSSILDEAVKHIKGLE 140
                     6*********************75..8889***************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 291 aa     Download sequence    
MDVNGDQDSF LSENNEEWTC FLNDCDYSDG ESNEKSRKTV PDFNASSSQS PLLPKVDVAI  60
PASTSVTRVV SSGNINDSGD DVREPVENHE RHLWTERERR KKMRDMFTNL QALLPHQFHP  120
NKVDKSSILD EAVKHIKGLE STLSDLQRQK SEMLESSKTR TILGMTDMAD QRGTFASDNG  180
TMMMSSIPHM TSIPPSDHVF KTWTSPNVTL NVCGNDAHIN VCCSKKFGVL AAICSVLEKY  240
KIDVLSAHVS SDHNKSMYMI HARVIAGGYE GQFPVEEIYK EAATEIIGVC G
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49770.16e-38bHLH family protein