PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019165447.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | GATA | ||||||||
Protein Properties | Length: 344aa MW: 37856.4 Da PI: 7.6594 | ||||||||
Description | GATA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GATA | 57.5 | 1.9e-18 | 255 | 288 | 1 | 34 |
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 Cs+C++ kTp+WR gp g+ktLCnaCG++y++ + XP_019165447.1 255 CSHCQVQKTPQWRTGPMGPKTLCNACGVRYKSGR 288 *******************************987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 344 aa Download sequence |
MECIEARAFK SSALKKIAMK SNQQVFFDDV WCLAGLNNVG SDDFSVDDLL DFSDKDFSES 60 RSSLDSEEVE GRKSSFSLVS PHHRNYNSQT FSGTEDFGSL STGQFLLPVD DMENLEWLSR 120 IVDDSSSELS LFCPNPSFQP ATGTFLENRC EPVIIQAAQN IKPPLPVPVQ RKQRSKRSRL 180 SGKVWSYVAP SLTSESSSPS SSYGSSSLPG MSCANPVHDG DLFSSVEKPP AKKLKRKSSV 240 ETGPGSGVTQ TLRRCSHCQV QKTPQWRTGP MGPKTLCNAC GVRYKSGRLF PEYRPACSPT 300 FSLEIHSNSH RKVLEMRRKK EDTEVIDAGS GSGSTTPALV ENFQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G66320.2 | 4e-54 | GATA family protein |