PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019165370.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

bZIP

Protein Properties

Length: 616aa MW: 67306.1 Da PI: 7.5764

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019165370.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	33.6	8.4e-11	432	480	5	53
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelk 53 kr++r NR +A rs +RK +i+eLe kv++L++e ++L +l l+ XP_019165370.1 432 KRAKRILANRQSAARSKERKMRYIAELEHKVQTLQTEATTLSAQLTLLQ 480 9*****************************************9998775 PP

Sequence ? help Back to Top
Protein Sequence Length: 616 aa Download sequence
MGGNGEEVNT DMIQRLQSSF GKSSSPVLPK QQQQPGSMNQ LDIPQLNTSQ FQSQMRQFSP 60 NFSSENTSKR AGIPPSHPQM PPISPYSQIP VSRQVNQQMG VQNFSASSPG PSHSRSLSQP 120 SFFSLDSLPP LSPSPYRESP LTSLTDHMST DASMGERDGN SHSLLPPSPF SKCNSMRAGE 180 SLPPRKSHRR SNSDIPFGFS SILQSSPPLV PLGSAGVLDR SLPAKENSGG KPVQLVKRET 240 SVDKGSESNA EGMGERKFEG EIVDDLFSAY MNLDTIDALN SSGADEKLGS ENHEDLDSRA 300 SGTKTNGADS SDNEATSSIN ESGNSMHMSG VPASTEKREG IKRNAGGDIA PTTRHYRSVS 360 MDSFMGKLNF DDSPKLPPSP GTRPGNLSPT NSLDSNSNTF SLEFGNGEFS GAELKKIMAN 420 EKLAEIALTD PKRAKRILAN RQSAARSKER KMRYIAELEH KVQTLQTEAT TLSAQLTLLQ 480 VLMLHCLKHF FVAGLLIFII LLSFSFIIQR DSAGLTSQNN ELKFRLQAME QQAQLRDALN 540 EALTAEVQRL KIATAELNGD ATKFQQLSIN PQMLPMHQHQ SARVNMHQLQ QQQQHQQSSQ 600 PQPQHNNTAS AKHESK

Sequence ? help Back to Top

Protein Sequence Length: 616 aa Download sequence

MGGNGEEVNT DMIQRLQSSF GKSSSPVLPK QQQQPGSMNQ LDIPQLNTSQ FQSQMRQFSP  60
NFSSENTSKR AGIPPSHPQM PPISPYSQIP VSRQVNQQMG VQNFSASSPG PSHSRSLSQP  120
SFFSLDSLPP LSPSPYRESP LTSLTDHMST DASMGERDGN SHSLLPPSPF SKCNSMRAGE  180
SLPPRKSHRR SNSDIPFGFS SILQSSPPLV PLGSAGVLDR SLPAKENSGG KPVQLVKRET  240
SVDKGSESNA EGMGERKFEG EIVDDLFSAY MNLDTIDALN SSGADEKLGS ENHEDLDSRA  300
SGTKTNGADS SDNEATSSIN ESGNSMHMSG VPASTEKREG IKRNAGGDIA PTTRHYRSVS  360
MDSFMGKLNF DDSPKLPPSP GTRPGNLSPT NSLDSNSNTF SLEFGNGEFS GAELKKIMAN  420
EKLAEIALTD PKRAKRILAN RQSAARSKER KMRYIAELEH KVQTLQTEAT TLSAQLTLLQ  480
VLMLHCLKHF FVAGLLIFII LLSFSFIIQR DSAGLTSQNN ELKFRLQAME QQAQLRDALN  540
EALTAEVQRL KIATAELNGD ATKFQQLSIN PQMLPMHQHQ SARVNMHQLQ QQQQHQQSSQ  600
PQPQHNNTAS AKHESK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38900.3	1e-135	bZIP family protein