PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019165359.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | bHLH | ||||||||
Protein Properties | Length: 331aa MW: 36956.8 Da PI: 6.7842 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 30.3 | 7.5e-10 | 145 | 192 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L++l+P + +k Ka +L + ++Y++sLq XP_019165359.1 145 SHSLAERVRREKISERMRYLQDLVPGC----NKITGKAGMLDEIINYVQSLQ 192 8**************************....999*****************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 331 aa Download sequence |
MGSSMLFPPV QLQGLMNYDD QNLIQILENY GWIERPSDIG INYALSSCSP AATSAAGKKK 60 DDAFPPENLG RESFKRRKTD KAVAVAEEER KDRWKQKGCQ EDVRSSEQTD NNSKKEHSTD 120 TSKVTQDKKS DYIHVRARRG QATDSHSLAE RVRREKISER MRYLQDLVPG CNKITGKAGM 180 LDEIINYVQS LQKQVEFLSM KLAAVNPRLD FNIDSLFTKE MFQSSPSNFP PVGIISDVST 240 PSNLLQLVAS LGLEIGISPS DMPLRTTINS PVSLPKTLLN SSAINQGQTC PIWDGELQNL 300 YAMEVQQGRS PSFTSQPFMG FVEGSNPRME I |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 58 | 78 | KKKDDAFPPENLGRESFKRRK |
2 | 75 | 95 | KRRKTDKAVAVAEEERKDRWK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G34530.1 | 5e-63 | bHLH family protein |