PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019165347.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family bHLH
Protein Properties Length: 308aa    MW: 33416.7 Da    PI: 6.9761
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019165347.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH42.21.5e-1389133755
                     HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                       Er RR++++s f++L  llP++     +K +K++i+ +Av+YIk Lq
  XP_019165347.1  89 WTERERRKKMRSMFSNLHALLPQL----PPKADKSTIVDEAVNYIKTLQ 133
                     57*********************6....39******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 308 aa     Download sequence    
MLMGDGSAQD CFIWEDQAWT MTTNSGNSGE KSGQCKLPGS GTSDCQLPPT GRKRPRASES  60
NGDGGRGKGI EAKSGGGGGA ESDHEVHIWT ERERRKKMRS MFSNLHALLP QLPPKADKST  120
IVDEAVNYIK TLQQTLQKLQ NRKLEILHGF NCGNPSPSIF GSQKLNAELT TREAFLADHH  180
QGSSGGGLAS FIGSSSAADA LLPPQPPAFQ TWTSPNVILN VCGDDAQISL CCPKKPGLFP  240
AICFVLEKHK IEVVSAQVSS DHHRTMYMVQ ARANRPPCDD LFSEMSVSVE EVYKQAAGEI  300
MLWIANQY
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
15157GRKRPRA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49770.13e-46bHLH family protein