PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019165192.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | ERF | ||||||||
Protein Properties | Length: 119aa MW: 13395.1 Da PI: 6.6977 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 62.8 | 7.4e-20 | 13 | 63 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpse.ngkrkrfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr ++ +g++ +eIrd + ng r++lg+++taeeAa+a+++a+ +++g XP_019165192.1 13 KYRGVRKRP-WGKYGVEIRDS-NrNG--VRVWLGTYDTAEEAARAYDRAAYEMRG 63 8********.**********4.4254..*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 119 aa Download sequence |
MEEARRKNSE EVKYRGVRKR PWGKYGVEIR DSNRNGVRVW LGTYDTAEEA ARAYDRAAYE 60 MRGKFAVLNF PGEYPSTLNG SCSPATPPVG KGFVEKGTAK EVIEFECLDD KLLEELLAG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G23220.1 | 1e-21 | ERF family protein |