PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019165178.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | SRS | ||||||||
Protein Properties | Length: 213aa MW: 23319.8 Da PI: 7.9527 | ||||||||
Description | SRS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF702 | 169.4 | 1.9e-52 | 21 | 152 | 5 | 154 |
DUF702 5 tasCqdCGnqakkdCaheRCRtCCksrgfdCathvkstWvpaakrrerqqqlaaasskaaasaaeaaskrkrelkskkqsalsstklssaeskke 99 +++CqdCGnq+kkdCa++RCRtCCksrgf+C thvkstWvp+ krr r+ +l++ +a++kr r + l++ XP_019165178.1 21 NSRCQDCGNQSKKDCAYMRCRTCCKSRGFECPTHVKSTWVPVCKRRPRHLHLSQH-------PLTANPKRYRPP-----QHLQNPPF------FG 97 679********************************************96555443.......234556666653.....33333333......33 PP DUF702 100 letsslPeevsseavfrcvrvssvddgeeelaYqtavsigGhvfkGiLydqGlee 154 e ++P+evs +avfrcvrvs+vd+ge+++aYqt+v+i+GhvfkGiLydqG+e+ XP_019165178.1 98 GEEGNFPAEVSFPAVFRCVRVSAVDNGEDQYAYQTSVNIAGHVFKGILYDQGAES 152 45568***********************************************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 213 aa Download sequence |
MMMTMRDEDD EEQEGGSSGS NSRCQDCGNQ SKKDCAYMRC RTCCKSRGFE CPTHVKSTWV 60 PVCKRRPRHL HLSQHPLTAN PKRYRPPQHL QNPPFFGGEE GNFPAEVSFP AVFRCVRVSA 120 VDNGEDQYAY QTSVNIAGHV FKGILYDQGA ESRYNTGGES SSGGGGGFQP PSNLLSTAAT 180 TAATSNASPP SYPSPFSTTN FMPGTHFFPY PKS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G51060.1 | 8e-51 | SRS family protein |