PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019165077.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family bHLH
Protein Properties Length: 266aa    MW: 28721 Da    PI: 6.3682
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019165077.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH30.94.7e-10149196455
                     HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     +h+ +Er RR++i +++ +L++l+P +    +k   Ka +L + ++Y++sLq
  XP_019165077.1 149 SHSLAERARREKISERMKTLQDLVPGC----NKVIGKALVLDEIINYVQSLQ 196
                     8*************************9....677*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 266 aa     Download sequence    
MDPMMNGGGG AFQVANNVPF NLVEIWPFPI NASAAAAAAA QFGLGAPPNV HGLNRDHGPP  60
VSDPMALDGR VDQNGSGGAR KRREDDESAM GVSTSGNSLS ENDSKRVKTA RANENCEFKA  120
DSEGTSGKPA EPPKDYIHVR ARRGQATDSH SLAERARREK ISERMKTLQD LVPGCNKVIG  180
KALVLDEIIN YVQSLQRQVE FLSMKLETVN SRMTPSIEGF PSKDFPPQAF DASSLAFGSQ  240
TTRDYQSGTS PDWLHMQIGG GFERTT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G59640.12e-93bHLH family protein