PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019165064.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family bHLH
Protein Properties Length: 309aa    MW: 33831 Da    PI: 7.3038
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019165064.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH44.42.9e-14120166354
                     HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                     ++h+e+ErrRR+riN+ +++Lr+llP+      +K +Ka+ L ++++++k+L
  XP_019165064.1 120 KSHSEAERRRRERINNHLAKLRSLLPNT-----TKTDKASLLAEVIQHVKEL 166
                     79*************************9.....8****************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 309 aa     Download sequence    
MQPQSSTDAY TGGAGMSSPI FPWSFTPVQP YNPVHYSGRD HDPFLLPPAP SPYGGFFSRK  60
QSLPFAYDDA PPSDHLRLIS DTLLGQVVHP GSGGPFGLQA ELQKLAAQEI MDAKALAASK  120
SHSEAERRRR ERINNHLAKL RSLLPNTTKT DKASLLAEVI QHVKELKRQT SVIAETTPVP  180
TVTDELTVDN VSGEVGNNKL LIRATLCCDD RSDLLPDLIK SLKGLRLKAL RAEITTLGGR  240
MRNVLFITRE NDRGGGGDCD GDDESLQSIS SVEDALRAVM ERSNGGEDQS GSVKRQRTNN  300
INIFQQHHK
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1126131ERRRRE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68810.15e-83bHLH family protein