PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_019165029.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
|
||||||||
Family | ERF | ||||||||
Protein Properties | Length: 370aa MW: 40876.5 Da PI: 4.3266 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 62.4 | 1e-19 | 109 | 159 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55 s+ +GVr++k +g+W+AeIrdp kr++lg+fgtaeeA +a++ r+++e XP_019165029.1 109 SKLRGVRQRK-WGKWAAEIRDP-----FlgKRVWLGTFGTAEEASRAYEMKRLEFEE 159 789******9.**********6.....335**********************99885 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 370 aa Download sequence |
MLLSNHPTGG RAMKPRAEPG KPMRRIRIVC EDPDATDSSD DERLDVKKPR MFVREILCPV 60 PDSFKNQVKG LETEGFSSQD SSNEAKRNNL KKKRVLAKTP GQSRPSNPSK LRGVRQRKWG 120 KWAAEIRDPF LGKRVWLGTF GTAEEASRAY EMKRLEFEEA MAKNGINSDK GSDVYMVDNH 180 DINRSGSVVV SDPPGKGKAV ACVSEDSVGS LVSHTSPSSV LELESFTSAV ANVKVDNEKT 240 DDDCVEKKTP EVPGGIDDEI LVSQLFETVD NVPDLLDETL SMAQMADDMD LARQLDAAFA 300 SDEYTGFDDF GLGDFDNFDL PFCGIDGHDE QIPTSLPDFD FDFNFDDCNE EWIDEPPLVP 360 GSTPLNIACP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G68550.1 | 2e-28 | ERF family protein |