PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019165028.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family ERF
Protein Properties Length: 370aa    MW: 40876.5 Da    PI: 4.3266
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019165028.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.41e-19109159155
             AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55 
                     s+ +GVr++k +g+W+AeIrdp        kr++lg+fgtaeeA +a++  r+++e 
  XP_019165028.1 109 SKLRGVRQRK-WGKWAAEIRDP-----FlgKRVWLGTFGTAEEASRAYEMKRLEFEE 159
                     789******9.**********6.....335**********************99885 PP
Sequence ? help Back to Top
Protein Sequence    Length: 370 aa     Download sequence    
MLLSNHPTGG RAMKPRAEPG KPMRRIRIVC EDPDATDSSD DERLDVKKPR MFVREILCPV  60
PDSFKNQVKG LETEGFSSQD SSNEAKRNNL KKKRVLAKTP GQSRPSNPSK LRGVRQRKWG  120
KWAAEIRDPF LGKRVWLGTF GTAEEASRAY EMKRLEFEEA MAKNGINSDK GSDVYMVDNH  180
DINRSGSVVV SDPPGKGKAV ACVSEDSVGS LVSHTSPSSV LELESFTSAV ANVKVDNEKT  240
DDDCVEKKTP EVPGGIDDEI LVSQLFETVD NVPDLLDETL SMAQMADDMD LARQLDAAFA  300
SDEYTGFDDF GLGDFDNFDL PFCGIDGHDE QIPTSLPDFD FDFNFDDCNE EWIDEPPLVP  360
GSTPLNIACP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68550.12e-28ERF family protein