PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019164896.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family bHLH
Protein Properties Length: 306aa    MW: 32255.8 Da    PI: 6.5233
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019164896.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH29.31.6e-09154198554
                     HHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
             HLH   5 hnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 
                     h+++Er RR+ri +++  L++l+P+ +      K + a +L + v+Y+k L
  XP_019164896.1 154 HSIAERLRRERIAERIRALQDLVPSvN------KTDRAVMLDEIVDYVKFL 198
                     99***********************55......****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 306 aa     Download sequence    
MSNNPTDGSS EDFFDQILGF PAYAAADANL AGNGAGGLAG TAAAAPMMLQ LSSGDGSAHL  60
GGVRIGMGLG GVGGPFHGTG AAPFPLGLSL EQGRGEFMKM DESSASMKMD IRASSSMKPG  120
FHGQLMPSSV PAMPHPPAIR PRVRARRGQA TDPHSIAERL RRERIAERIR ALQDLVPSVN  180
KTDRAVMLDE IVDYVKFLRL QVKVLSMSRL GGAGAVAPLV TDIPISLVEE EGGSEAGRTQ  240
PAWEKWSNDG TERQVAKLME ENVGAAMQFL QSKALCIMPI SLASAIYHSQ APDTTPLVKP  300
ETNPPS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1159164RLRRER
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G02590.22e-93bHLH family protein