PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019164686.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family bHLH
Protein Properties Length: 329aa    MW: 36367 Da    PI: 6.113
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019164686.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH45.81.1e-144392255
                    HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH  2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                    r +h+  E+rRR++iN++f+ Lr+l+P+     ++K + a+ L ++++Y++ Lq
  XP_019164686.1 43 RSKHSVTEQRRRSKINERFQILRDLIPNT----DQKRDTASFLLEVIQYVQFLQ 92
                    899*************************8....8*******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 329 aa     Download sequence    
MKTVKSHEEE EDEEELGSKR DATNSNSNTS RDGKNSDKAN AIRSKHSVTE QRRRSKINER  60
FQILRDLIPN TDQKRDTASF LLEVIQYVQF LQEKVQKYEG SYQPWSSEPT KLMPWRNSHW  120
RMQSFVGSPQ IVKNGTGPGP TYAGRFDENP VTVPSAMQPI QQNPIESHPS SDSAFNAVDS  180
HNELATKAVT TPMTLQASLP AAVQNEGSYS HTTPRPASDA QSNECPNRIE ALSHREESTI  240
EGGTISISSV YSEGLLNSLA QALQSTGVDL SQATISVQIN LGKRANRGLN SSLMDTNDKP  300
APSVCPAVGH FRDTSTDDDL DQAQKRLRI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69010.18e-88bHLH family protein