PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_019164680.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
|
||||||||
Family | bHLH | ||||||||
Protein Properties | Length: 442aa MW: 47958.7 Da PI: 5.9794 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 27.1 | 7.4e-09 | 269 | 317 | 3 | 55 |
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L++l+P + +k Ka +L + ++Y++sLq XP_019164680.1 269 NSHSLAERVRREKISERMKFLQDLVPGC----NKVIGKAVMLDEIINYVQSLQ 317 58*************************9....677*****************9 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 442 aa Download sequence |
MDHMDEFEAE RRADDDDGGV NLFNSSNMNT ANLGMGMVPN SNPSIDSFCS AIWDQPNPVN 60 HLVLGLGDAN NVEFEPSRIS GGNGSFGVPP NGMLKGSTLL PPAVPGLLPP PRFLPHFQVD 120 SDFVERAARF SCFGGGNVMN PFNTLECINA HSKGLAPPPQ TQRPREALVG NGLKNESLPI 180 GHNFAEEAKE RAGVSEAESD GLECLSESAV GQSSAKGLGS KKRKRRGQGA ELDQNKREPG 240 NDDKQGSQTS DTPKDEYIHV RARRGQATNS HSLAERVRRE KISERMKFLQ DLVPGCNKVI 300 GKAVMLDEII NYVQSLQRQV EFLSMKLATI NPGLDFNSDV VFTKEISRAA SSSSSLAFPP 360 DMAMPYPPIH SPQPMLIQGG LPGLENSTVA LHRTNKDHPT SKVSNTWSEF HNVFQMGFNS 420 TAPLSSQFTS SLPPPDLTKT EP |
Nucleic Localization Signal ? help Back to Top | |||
---|---|---|---|
No. | Start | End | Sequence |
1 | 221 | 226 | KKRKRR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G68920.3 | 6e-64 | bHLH family protein |