PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019164615.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

Dof

Protein Properties

Length: 226aa MW: 24587 Da PI: 10.1811

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019164615.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	106.6	1.3e-33	44	100	3	60
zf-Dof 3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkk 60 + lkcprC s+ntkf yynny+ sqPr+fCk+C+r+Wt+GG+lrnvPvGg+ rknk+ XP_019164615.1 44 MQPLKCPRCASANTKFYYYNNYNKSQPRHFCKGCKRHWTEGGTLRNVPVGGS-RKNKR 100 5789*********************************************976.66665 PP

Sequence ? help Back to Top
Protein Sequence Length: 226 aa Download sequence
MGLSTKQVSG GDHQPGIIEW DNPPTGGNTR LDLPAVVQPP QKAMQPLKCP RCASANTKFY 60 YYNNYNKSQP RHFCKGCKRH WTEGGTLRNV PVGGSRKNKR LKTPPNPIAA AAVTSAPAAT 120 ADQKPGKQKN NNTPTIFFPA DPVIGNNVAA TAAFNIGPST PMVLHDDQDT TAKLLPFSFS 180 TYFDPISCSI PSFNTQSSFY ERKRCRLVKG LVTCTSLLAH FSKAYA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G28310.1	4e-23	Dof family protein