PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019164307.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | CO-like | ||||||||
Protein Properties | Length: 341aa MW: 38283.9 Da PI: 5.9705 | ||||||||
Description | CO-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-B_box | 16.6 | 1.6e-05 | 7 | 49 | 4 | 40 |
zf-B_box 4 rkCpeHeekelqlfCedCqqllCedClleeHkg......Htvv 40 r C+ ++ + l+C+ ++ lC +C e H+ Ht++ XP_019164307.1 7 RLCDFCGYCTAVLYCTADSAKLCLSCDREVHSTnqlftkHTRS 49 78****9977*********************668888888875 PP | |||||||
2 | zf-B_box | 22.3 | 2.7e-07 | 50 | 93 | 4 | 42 |
zf-B_box 4 rkCpeHeekelqlfCedCqqllCedClleeHkg......Htvvpl 42 C+ +++ ++++fC + lC++C e+H + H+++p+ XP_019164307.1 50 LLCDACDSSPASIFCSMDAAVLCHTCHWESH-SpalsppHDCCPV 93 57*****************************.5599999999886 PP | |||||||
3 | CCT | 65.5 | 1.5e-22 | 290 | 334 | 1 | 45 |
CCT 1 ReaallRYkeKrktRkFeKkirYesRKavAesRpRvKGrFvkqae 45 Re a++RYkeKrktR+FeK+irYesRK++AesR R+KGrF+k+++ XP_019164307.1 290 RETAITRYKEKRKTRRFEKQIRYESRKVRAESRARIKGRFAKKDQ 334 99****************************************975 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 341 aa Download sequence |
MLKERHRLCD FCGYCTAVLY CTADSAKLCL SCDREVHSTN QLFTKHTRSL LCDACDSSPA 60 SIFCSMDAAV LCHTCHWESH SPALSPPHDC CPVEQFSGRP SLNELLFVLG FENVSKKSLL 120 SGDDADNDEY LDYLVWDTPS GVDDYDVPLP KNQNAACGQH KADILCQLRD MLKLEPNFAT 180 EDEDFEPMRS FQSMEPKSTE LKQKVESTLV PSSEASGFQT SKFVEQGIAS SLFGGFVETN 240 CLVPDKDSDT GDGSVLANDH SKGQSQHSSI TDTMQVLPRV APRELNSQER ETAITRYKEK 300 RKTRRFEKQI RYESRKVRAE SRARIKGRFA KKDQRDTAIH G |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G47890.1 | 8e-67 | CO-like family protein |