PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_019163949.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
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Family | MYB | ||||||||
Protein Properties | Length: 555aa MW: 60180.8 Da PI: 5.2288 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 56.6 | 6.1e-18 | 39 | 86 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT Ed +lvd+v+++G g+W+++ ++ g+ R++k+c++rw ++l XP_019163949.1 39 KGPWTSAEDAILVDYVTKHGEGNWNAVQKHSGLARCGKSCRLRWANHL 86 79******************************************9986 PP | |||||||
2 | Myb_DNA-binding | 49.5 | 9.9e-16 | 92 | 135 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +g++T+eE+ +++++++++G++ W++ a++++ gRt++++k++w++ XP_019163949.1 92 KGSFTPEEEGRIIELHAKMGNK-WARMAAELP-GRTDNEIKNYWNT 135 799*******************.*********.***********96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 555 aa Download sequence |
MSMTSESEDR MTFKGSVSSP SIEEATAGGK TGGSVLLKKG PWTSAEDAIL VDYVTKHGEG 60 NWNAVQKHSG LARCGKSCRL RWANHLRPDL KKGSFTPEEE GRIIELHAKM GNKWARMAAE 120 LPGRTDNEIK NYWNTRIKRR QRAGLPIYPP DLCLKSINAS KQNGDMNIFS IGDMQHPDLF 180 QINCFEIPAV EFKNLELNQH SYPPPALVDI PASSLLDIPS SSLVGQGLKS SCGNRYFQST 240 VHPSKRLRGT ETLFPGLSDN GSDFLPACSR FQSGNSAAAY IAAAQSFGVS SAYNQNLASD 300 DPSLLSVIPG SHATLNGNSS YSSEPSWEKK PELPSLQSQM GSWYSPSSSP LPSLESIDTL 360 IQSPPPTEHT ESGSLSPRNS GLLDAVLYES QTLKHSKNNN TSSQQTTSDA SIIRGSIVDN 420 SCPDLHDTEW EAYGDPISPY GHSSASVFSE YTPAVNLDEA QTVVAGCKVK QEEEGMELSP 480 MQCGDTGRDD EESFQNMFSS CFGSQNHCVL KEVFGAVLLD DFSSRDCKNM RTISMATATS 540 SGGSPCAWDH AMSTV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G06100.1 | 2e-85 | MYB family protein |