PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019163870.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family ERF
Protein Properties Length: 284aa    MW: 31831.1 Da    PI: 4.9248
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019163870.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.24.8e-1980128355
             AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     y+G+r+++ +g+W+AeIrdp++     r++lg+f taeeAa+a+++ ++k++g
  XP_019163870.1  80 YRGIRQRP-WGKWAAEIRDPRK---GVRVWLGTFNTAEEAARAYDREARKIRG 128
                     9*******.**********954...4************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 284 aa     Download sequence    
MCGGAILFDL IPRNNNGGRR VSSADLWPSS ADCWPNSPAV KGTASNCSAQ NGCPSLKRCE  60
RCTGDERPER AKKRQRKNLY RGIRQRPWGK WAAEIRDPRK GVRVWLGTFN TAEEAARAYD  120
REARKIRGKK AKVNFPNEDF DDYNPRFQNA GTSFPYPVDS YYYRAEPAMG YSAQSEEASG  180
SISGSENGYY SCSQIGNEGS FMNQIKEEGE EEEEDKVVHV ANKAEEENQV QKLSEELMAY  240
ESYMKFYEIP YLDGQSAAPP EPMVGGGSLE LWSFDDVNPS CAQS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G16770.13e-32ERF family protein